The Upper Devonian Sandstone aquifer of Fife

The Devonian sandstone aquifer of Fife has long been recognised as one of the most important hydrogeological units in Scotland. Its importance was first acknowledged by Earp and Eden (1961), and the aquifer was later described by Foster et al (1976). Data were subsequently gathered together in map form (BGS, 1986) but little analysis of the aquifer was carried out other than a dissertation prepared by Barker (1981), occasional reports on specific issues such as nitrate pollution (e.g. Frost and Sargent, 1993; MacDonald, 1993; Ball, 1994), and the preparation of the 1: 100 000 scale Aquifer Vulnerability Map of Fife (SEPA, 1999). The aquifer currently supplies some 20 Ml/d during the winter, rising to 40 Ml/d in the summer months, when irrigation boreholes are put into use. Groundwater provides an important back up to public water supplies, particularly during dry years when river abstraction is restricted. Despite this, relatively little is known about the overall renewable resource potential of the aquifer. It is also only in recent years that means of safeguarding groundwater from pollution have been investigated in any detail. Renewed interest in the aquifer is now being driven on two fronts. The first is that the East of Scotland Water Authority (ESWA) needs to expand its source provision due to increasing demand. The second is that the Scottish Environment Protection Agency (SEPA) needs to look more closely at the aquifer potential if in the future groundwater abstraction licensing is introduced in significant aquifers (Robins and Ball, 1998). In addition, the requirements of the proposed EU Water Framework Directive indicate that a greater understanding of the aquifer and the sources it supplies will be needed in order to implement properly integrated surface and groundwater management on a catchment basis. With these goals in mind, the East of Scotland Water Authority, Scottish Environment Protection Agency and NERC have jointly commissioned this preliminary study of the Eden valley aquifer

JWalk: a tool for lazy, systematic testing of java classes by design introspection and user interaction

Popular software testing tools, such as JUnit, allow frequent retesting of modified code; yet the manually created test scripts are often seriously incomplete. A unit-testing tool called JWalk has therefore been developed to address the need for systematic unit testing within the context of agile methods. The tool operates directly on the compiled code for Java classes and uses a new lazy method for inducing the changing design of a class on the fly. This is achieved partly through introspection, using Java’s reflection capability, and partly through interaction with the user, constructing and saving test oracles on the fly. Predictive rules reduce the number of oracle values that must be confirmed by the tester. Without human intervention, JWalk performs bounded exhaustive exploration of the class’s method protocols and may be directed to explore the space of algebraic constructions, or the intended design state-space of the tested class. With some human interaction, JWalk performs up to the equivalent of fully automated state-based testing, from a specification that was acquired incrementally

Introduction to the functional RG and applications to gauge theories

These lectures contain an introduction to modern renormalization group (RG) methods as well as functional RG approaches to gauge theories. In the first lecture, the functional renormalization group is introduced with a focus on the flow equation for the effective average action. The second lecture is devoted to a discussion of flow equations and symmetries in general, and flow equations and gauge symmetries in particular. The third lecture deals with the flow equation in the background formalism which is particularly convenient for analytical computations of truncated flows. The fourth lecture concentrates on the transition from microscopic to macroscopic degrees of freedom; even though this is discussed here in the language and the context of QCD, the developed formalism is much more general and will be useful also for other systems.Comment: 60 pages, 14 figures, Lectures held at the 2006 ECT* School "Renormalization Group and Effective Field Theory Approaches to Many-Body Systems", Trento, Ital

Nucleon charge exchange on the deuteron: A critical review

The existing experimental data on the d(n,p)nn and d(p,n)pp cross sections in the forward direction are reviewed in terms of the Dean sum rule. It is shown that the measurement of the ratio of the charge exchange on the deuteron to that on the proton might, if taken together with other experimental data, allow a direct construction of the np -> np scattering amplitude in the backward direction with few ambiguities.Comment: 7 pages with 3 figure

Automated Classification of Sloan Digital Sky Survey (SDSS) Stellar Spectra using Artificial Neural Networks

Automated techniques have been developed to automate the process of classification of objects or their analysis. The large datasets provided by upcoming spectroscopic surveys with dedicated telescopes urges scientists to use these automated techniques for analysis of such large datasets which are now available to the community. Sloan Digital Sky Survey (SDSS) is one of such surveys releasing massive datasets. We use Probabilistic Neural Network (PNN) for automatic classification of about 5000 SDSS spectra into 158 spectral type of a reference library ranging from O type to M type stars.Comment: 27 pages, 11 figures To appear in Astrophys. Space Sci., 200

Nonperturbative renormalization group approach to frustrated magnets

This article is devoted to the study of the critical properties of classical XY and Heisenberg frustrated magnets in three dimensions. We first analyze the experimental and numerical situations. We show that the unusual behaviors encountered in these systems, typically nonuniversal scaling, are hardly compatible with the hypothesis of a second order phase transition. We then review the various perturbative and early nonperturbative approaches used to investigate these systems. We argue that none of them provides a completely satisfactory description of the three-dimensional critical behavior. We then recall the principles of the nonperturbative approach - the effective average action method - that we have used to investigate the physics of frustrated magnets. First, we recall the treatment of the unfrustrated - O(N) - case with this method. This allows to introduce its technical aspects. Then, we show how this method unables to clarify most of the problems encountered in the previous theoretical descriptions of frustrated magnets. Firstly, we get an explanation of the long-standing mismatch between different perturbative approaches which consists in a nonperturbative mechanism of annihilation of fixed points between two and three dimensions. Secondly, we get a coherent picture of the physics of frustrated magnets in qualitative and (semi-) quantitative agreement with the numerical and experimental results. The central feature that emerges from our approach is the existence of scaling behaviors without fixed or pseudo-fixed point and that relies on a slowing-down of the renormalization group flow in a whole region in the coupling constants space. This phenomenon allows to explain the occurence of generic weak first order behaviors and to understand the absence of universality in the critical behavior of frustrated magnets.Comment: 58 pages, 15 PS figure

Production and Decay of D_1(2420)^0 and D_2^*(2460)^0

We have investigated $D^{+}\pi^{-}$ and $D^{*+}\pi^{-}$ final states and observed the two established $L=1$ charmed mesons, the $D_1(2420)^0$ with mass $2421^{+1+2}_{-2-2}$ MeV/c$^{2}$ and width $20^{+6+3}_{-5-3}$ MeV/c$^{2}$ and the $D_2^*(2460)^0$ with mass $2465 \pm 3 \pm 3$ MeV/c$^{2}$ and width $28^{+8+6}_{-7-6}$ MeV/c$^{2}$. Properties of these final states, including their decay angular distributions and spin-parity assignments, have been studied. We identify these two mesons as the $j_{light}=3/2$ doublet predicted by HQET. We also obtain constraints on {\footnotesize $\Gamma_S/(\Gamma_S + \Gamma_D)$} as a function of the cosine of the relative phase of the two amplitudes in the $D_1(2420)^0$ decay.Comment: 15 pages in REVTEX format. hardcopies with figures can be obtained by sending mail to: [email protected]

Relating the microscopic rules in coalescence-fragmentation models to the macroscopic cluster size distributions which emerge

Coalescence-fragmentation problems are of great interest across the physical, biological, and recently social sciences. They are typically studied from the perspective of the rate equations, at the heart of such models are the rules used for coalescence and fragmentation. Here we discuss how changes in these microscopic rules affect the macroscopic cluster-size distribution which emerges from the solution to the rate equation. More generally, our work elucidates the crucial role that the fragmentation rule can play in such dynamical grouping models. We focus on two well-known models whose fragmentation rules lie at opposite extremes setting the models within the broader context of binary coalescence-fragmentation models. Further, we provide a range of generalizations and new analytic results for a well-known model of social group formation [V. M. Eguiluz and M. G. Zimmermann, Phys. Rev. Lett. 85, 5659 (2000)]. We develop analytic perturbation treatment of the original model, and extend the mathematical to the treatment of growing and declining populations

Transcript- and annotation-guided genome assembly of the European starling

First published: 28 June 2022The European starling, Sturnus vulgaris, is an ecologically significant, globally invasive avian species that is also suffering from a major decline in its native range. Here, we present the genome assembly and long- read transcriptome of an Australian-sourced European starling (S. vulgaris vAU), and a second, North American, short- read genome assembly (S. vulgaris vNA), as complementary reference genomes for population genetic and evolutionary characterization. S. vulgaris vAU combined 10× genomics linked- reads, low-coverage Nanopore sequencing, and PacBio Iso-Seq full- length transcript scaffolding to generate a 1050 Mb assembly on 6222 scaffolds (7.6 Mb scaffold N50, 94.6% busco completeness). Further scaffolding against the high-quality zebra finch (Taeniopygia guttata) genome assigned 98.6% of the assembly to 32 puta-tive nuclear chromosome scaffolds. Species-specific transcript mapping and gene an-notation revealed good gene- level assembly and high functional completeness. Using S. vulgaris vAU, we demonstrate how the multifunctional use of PacBio Iso-Seq tran-script data and complementary homology-based annotation of sequential assembly steps (assessed using a new tool, saaga) can be used to assess, inform, and validate assembly workflow decisions. We also highlight some counterintuitive behaviour in traditional busco metrics, and present buscomp, a complementary tool for assembly comparison designed to be robust to differences in assembly size and base-calling quality. This work expands our knowledge of avian genomes and the available toolkit for assessing and improving genome quality. The new genomic resources presented will facilitate further global genomic and transcriptomic analysis on this ecologically important species.Katarina C. Stuart, Richard J. Edwards, Yuanyuan Cheng, Wesley C. Warren, David W. Burt, William B. Sherwin, Natalie R. Hofmeister, Scott J. Werner, Gregory F. Ball, Melissa Bateson, Matthew C. Brandley, Katherine L. Buchanan, Phillip Cassey, David F. Clayton, Tim De Meyer, Simone L. Meddle, Lee A. Rollin